DBTSS: Database of Transcriptional Start Sites
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | The University of Tokyo The Institute of Medical Science Human Genome Center (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | DBTSS provides precise positional information for transcription start sites (TSSs) of eukaryotic mRNAs. One characteristic of DBTSS is coverage of TSS information on a major part of human adult and embryonic tissues. To identify single nucleotide variations (SNVs) in the regulatory regions, TSS information are associated with public and original SNVs data. For example, this database includes RNA-seq data of subcellular-fractionated RNAs, ChIP Seq data of histone modifications and binding sites of RNA polymerase II / several transcription factors in cultured cell lines. |
| Organism(s) covered: | , , , , , , |
| Tag - Target: | Genome/Gene, cDNA/EST, Genetic variation, DNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | Japanese, English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
- |
|
Link to TogoTV:
|
|
|
Link to FAIRsharing:
|
https://fairsharing.org/biodbcore-000024 |
|
Similar databases:
|
FLJ Human cDNA Database JCRB Gene Bank PEDE Transmembrane Helices in Genome Sequences PLSDB PigGIS Beijing Genomics Institute Rice Information System Cassava Online Archive DNA database (DDBJ/EMBL/GenBank=INSD) overview and search KaTomicsDB |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-06-17 |
|
Last update date of this record:
|
2013-06-17 |
|
Record license:
|
Creative Commons CC0 license |