RetroRules
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| Alternative name: | - |
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| Database maintenance site: | INRAE (National Research Institute for Agriculture, Food and Environment) |
| Country/Region: | France |
| Database description: | RetroRules is a database of reaction rules for metabolic pathway. It provides a complete set of reaction rules, which were extracted from public databases and expressed in the community-standard SMARTS format, augmented by a rule representation at different levels of specificity (the atomic environment around the reaction center). Each record contains information such as EC Number, Penalty Score, Diameter, Direction, Has Stereo, Reaction rules, Related mono-component reaction(s), etc. Users can search records by EC number, reaction ID or substrate structure query. |
| Organism(s) covered: | |
| Tag - Target: | Metabolite, Protein |
| Tag - Information type: | Chemical structure, Interaction/Pathway |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://retrorules.org/dl |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | https://retrorules.org/dl |
| Link(s) to "How to use": | - |
| Contact information of database: | https://retrorules.org/contact |
| Link(s) to API / SPARQL endpoint | https://retrorules.org/doc/api |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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EAWAG-BBD KNApSAcK Twins ReSpect M-path Rhea The Yeast Metabolome DataBase KNApSAcK Biological Activity (Metabolite Activity) RIKEN HIFI MS-MS Fragment Viewer Toxin and Toxin Target Database |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2020-04-14 |
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Last update date of this record:
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2021-08-05 |
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Record license:
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Creative Commons CC0 license |