Ancestral Genomes: Ancestral Genomes Resource
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| Database maintenance site: | USC (University of Southern California) |
| Country/Region: | United States |
| Database description: | Ancestral Genomes is a resource for the reconstructions of the protein-coding gene content of common ancestors of modern-day organisms. The reconstructed genes are based on the PANTHER database. All ancestral genes have information including stable identifier, protein name, reconstructed sequence, inferred GO functions and 'proxy genes' in extant species. Users can browse the Ancestral Genomes by selecting nodes in a species tree, and can compare an extant genome with any of its reconstructed ancestors. All data can be downloaded. |
| Organism(s) covered: | |
| Tag - Target: | Genome/Gene, Protein, Organism |
| Tag - Information type: | Ontology/Terminology/Nomenclature, Sequence, Taxonomy |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://ancestralgenomes.org/downloads |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | http://ancestralgenomes.org/contact-us |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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Evolutionary Genealogy of Genes: Non-supervised Orthologous Groups Database of Orthologous Groups CoevDB HGTree AgBase Nocardia farcinica Genome Project Page HomoloGene Taxonomy - NCBI HOGENOM GRAMENE |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2019-10-01 |
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Last update date of this record:
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2019-10-01 |
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Record license:
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Creative Commons CC0 license |