RiceVarMap v2.0: Rice Variation Map v2.0
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| Database maintenance site: | National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University |
| Country/Region: | China |
| Database description: | RiceVarMap v2.0 is a comprehensive database for rice genomic variation and its functional annotation. It provides curated information of 17,397,026 genomic variations (including 14,541,446 SNPs and 2,855,580 small INDELs) from sequencing data of 4,726 rice accessions. Phenotype data and GWAS results for 13 agronomic traits and 840 metabolite traits are also provided. The database provides various variation query functions and many useful analysis tools. The query results are available for users to download through the website. |
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| Tag - Target: | Genome/Gene, Genetic variation, Organism |
| Tag - Information type: | Phenotype, Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
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| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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CancerSplicingQTL Moroccan Genetic Disease Database Rice SNP-Seek Database Mouse Phenome Database denovo-db The European Genome-phenome Archive Infevers DisGeNET OGRO BGD |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2018-08-21 |
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Last update date of this record:
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2018-08-20 |
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Record license:
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Creative Commons CC0 license |