Inactive
(Over 14 days)
(Over 14 days)
PSSRdb: Polymorphic Simple Sequence Repeats Database
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| Database name: | |
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| Database maintenance site: | Centre for DNA Fingerprinting and Diagnostics |
| Country/Region: | India |
| Database description: | PSSRdb is a relational database of polymorphic simple sequence repeats (PSSRs) extracted from 85 different species of prokaryotes. It contains the data of perfect SSRs which are the tandem repeats of nucleotide motifs of the sizes 1-6 bp and exhibit intra-species polymorphism. PSSRs found in coding and non-coding regions were separately stored in two different logically connected databases. Both the databases contain 357 tables each of which contains an useful information pertaining to PSSRs viz., motif types, repeat copy numbers of SSRs, genomic location of SSRs, and information pertaining to the coding regions harboring or flanking the PSSRs. |
| Organism(s) covered: | , |
| Tag - Target: | Genetic variation, DNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://pssrdb.cdfd.org.in/download.html |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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PCR Primer Database for Gene Expression Detection and Quantification Transmembrane Helices in Genome Sequences MiGD Chicken Variation Database UgMicroSatdb GIB-IS OGRDB Drosophila polymorphism database Beijing Genomics Institute Rice Information System Dfam |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |