Closed
CoP: Co-expressed Biological Processes
 ID: | |
| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Kazusa DNA Research Institute (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | CoP is an integrated database consisting of multiple databases with information on co-expressed genes and biological processes in plants based on gene Ontology. The omics data in this database, originate from NCBI, TAIR and GRAMENE databases. For co-expression analyses in this database, the Confeito algorithm is used. The revised version, an upgrade from the CoexProcess database, was released on March 12, 2009. More than ten thousand probes and hundred chips are included and assembled Affymetrix geneChip microarrays include thale cress (Arabidopsis thaliana), soy beans (Glycine max), barley (Hordeum vulgare), rice (Oryza sativa), poplar (Populus trichocarpa), wheat (Triticum aestivum), grapes (Vitis vinifera), and maize (Zea mays), and other microarrays will be added in the future. |
| Organism(s) covered: | , , , , , , , |
| Tag - Target: | cDNA/EST |
| Tag - Information type: | Expression |
| Reference(s) - PubMed ID/DOI: | - |
| Language(s): | English |
| Operational status: | Closed |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
|
Link to LSDB Archive:
|
- |
|
Link to MEDALS Database list:
|
http://medals.jp/elist/detail/104.html |
|
Link to TogoTV:
|
- |
|
Link to FAIRsharing:
|
- |
|
Similar databases:
|
KEGG EXPRESSION Database READ MAEDA RED (Archive) SMD CleanEx MacroArray Analysis Page of Bradyrhizobium japonicum Mouse DNA Microarray PEDB yMGV |
|
Record maintainer
|
Integbio Database Catalog |
|
Record source:
|
|
|
Date of creation of this record:
|
2013-06-17 |
|
Last update date of this record:
|
2024-05-15 |
|
Record license:
|
Creative Commons CC0 license |