Inactive
(Over 14 days)
(Over 14 days)
ACLAME: A CLAssification of Mobile genetic Elements
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| Database name: | |
| Alternative name: | |
| URL: | |
| Database maintenance site: | Universite Libre de Bruxelles |
| Country/Region: | Belgium |
| Database description: | ACLAME Version 4 is a database of the mobile genetic elements (MGEs) as found in the genomes of all phages, plasmids and transposons known at present - 811 hosts in total. Information on 122,154 proteins, discovered to be present in 2,326 MGEs, is provided. The proteins were grouped in families as follows: The prophages contained 6,822 clusters, the plasmids 18,228 groups, the viruses and prophages 16,057 groups and the viruses 11,503 clusters. The database is in the process of developing a classification system of the functional modules of these MGEs at the protein level, gene level, and higher. Keyword and Blast search options are available. An option is also offered whereby host-specific groups of MGEs can be viewed. |
| Organism(s) covered: | , , |
| Tag - Target: | Genome/Gene, DNA, Protein |
| Tag - Information type: | Ontology/Terminology/Nomenclature |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | http://aclame.ulb.ac.be/perl/Aclame/Tools/exporter.cgi |
| Link(s) to Metadata of downloadable data: | http://aclame.ulb.ac.be/perl/Aclame/Tools/exporter.cgi |
| Link(s) to Terms of use: | http://aclame.ulb.ac.be/terms_of_use.html |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000549 |
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Similar databases:
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Germline Mutagenesis Database - SB transposon Transmembrane Helices in Genome Sequences TranspoGene Rhodococcus genome Project VGNC IUBMB Nomenclature wwPDB/RDF GENA HUGO Gene Nomenclature Committee Eukaryotic Genes |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2013-06-17 |
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Record license:
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Creative Commons CC0 license |