PDBj: Protein Data Bank Japan
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| Database maintenance site: | Osaka University Institute for Protein Research (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | PDBj in Japan maintains a single PDB archive of macromolecular structural data in conjunction with the RCSB, the BMRB in USA and the PDBe in EU as a member of the Worldwide Protein Data Bank. PDBj provides entry search with sequence homology and structure similarity, structural bioinformatics web services such as a molecular visualizing software and tutorials of them. From this website, users can deposit protein structural information solved by X-ray crystallography or NMR spectroscopy in the PDB. For the structure search, you can use PDBj Mine (http://pdbj.org/mine) . The PDBj data are updated on every Wednesday 9 a.m. (Japan time). |
| Organism(s) covered: | |
| Tag - Target: | DNA, RNA, Protein |
| Tag - Information type: | Image/Movie, 3D structure, Repository |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | Japanese, English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://pdbj.org/info/archive?lang=en |
| Link(s) to Metadata of downloadable data: | http://pdbj.org/help?PID=904 |
| Link(s) to Terms of use: | http://pdbj.org/info/terms-conditions?lang=en |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000498 |
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Similar databases:
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PDBe BMRB RCSB Protein Data Bank wwPDB JenaLib Structure MolMovDB VIPERdb Biomolecules Gallery BMRBj |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2022-05-29 |
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Record license:
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Creative Commons CC0 license |