D-HaploDB (Archive): Definitive Haplotype Database
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| Database maintenance site: | Kyushu University Medical Institute of Bioregulation (Link to J-Global) |
| Country/Region: | Japan |
| Database description: | D-HaploDB is a database of genome-wide definitive haplotypes that allows users to view SNP alleles, LD bins, and CNVs by sequence name, gene name, locus, or other landmark search query, with 1.7 million SNPs and 2,339 CNVRs determined with high-throughput array-based oligonucleotide hybridization techniques. The advantages of this technique include: 1. Haplotypes can be read directly from genotyping 2. CNVSs can be detected with higher signal-to-noise ratio 3. Heterozygous sites of overlapping CNVSs do not need to be resolved. |
| Organism(s) covered: | |
| Tag - Target: | Genetic variation |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | Japanese, English |
| Operational status: | Active |
| Link(s) to Downloadable data: | https://dbarchive.biosciencedbc.jp/en/dhaplodb/download.html |
| Link(s) to Metadata of downloadable data: | https://dbarchive.biosciencedbc.jp/data/dhaplodb/LATEST/README_e.html |
| Link(s) to Terms of use: | https://dbarchive.biosciencedbc.jp/en/dhaplodb/lic.html |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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https://dbarchive.biosciencedbc.jp/en/dhaplodb/desc.html |
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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dbQSNP (Archive) Tandem Repeats Database JSNP (Archive) iDog InSatDb BGD G-compass UgMicroSatdb DBcherry VarySysDB |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2022-01-13 |
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Record license:
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Creative Commons CC0 license |