OrtholugeDB
 ID: | |
| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | Fiona Brinkman Laboratory, Simon Fraser University |
| Country/Region: | Canada |
| Database description: | OrtholugeDB contains Ortholuge-based orthology predictions for completely sequenced bacterial and archaeal genomes. It is also a resource for reciprocal best BLAST-based ortholog predictions, in-paralog predictions (recently duplicated genes) and ortholog groups in Bacteria and Archaea. The Ortholuge method improves the specificity of high-throughput orthology prediction. |
| Organism(s) covered: | , |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Sequence, 3D structure, Classification |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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- |
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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- |
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Link to FAIRsharing:
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https://fairsharing.org/10.25504/FAIRsharing.675y92 |
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Similar databases:
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SitEx database of eukaryotic protein functional sites MoonProt Evolutionary Trace Server hGTOP CATH Protein Structure Classification UniLectin PhylomeDB RARTF Sequence-Structural Templates of Single-member Superfamilies ProtoNet |
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Record maintainer
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See the corresponding part in the FAIRsharing record. |
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Record source:
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 (2018-12-21)
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Date of creation of this record:
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2019-03-28 |
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Last update date of this record:
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2020-07-09 |
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Record license:
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Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |