List of Database Records  (records : )

Sort by:
Thumbnail
Database maintenance site: FlyBase administrators, MRC Human Genetics Unit, University of Edinburgh, LMB (MRC Laboratory of Molecular Biology), University of Cambridge, University of Edinburgh
Organism(s) covered: Drosophila melanogaster
Description: VFB is an interactive tool for neurobiologists to explore the detailed neuroanatomy, neuron connectivity and gene expression of Drosophila melanogaster. Our goal is to make it e... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: All
Description: MorphoBank is a web application providing an online database and workspace for evolutionary research in systematics (the science of determining the evolutionary relationships am... Show Details...
Database maintenance site: Weizmann Institute of Science
Organism(s) covered: Homo sapiens
Description: The MalaCards human disease database (http://www.malacards.org/) is an integrated compendium of annotated diseases mined from 68 data sources. MalaCards has a web card for each ... Show Details...
Thumbnail
Database maintenance site: BioGen, Wellcome Sanger Institute
Organism(s) covered: Homo sapiens
Description: Open Targets designed and developed an integration and visualization platform that provides evidence about the association of known and potential drug targets with diseases. The... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Ascomycota | Basidiomycota | Blastocladiomycota | Chytridiomycota | Fungi | ...
Description: The Face Of Fungi database allows deposition of taxonomic data, phenotypic details and other useful data. Its aim is to enhance current taxonomic understanding and ultimately en... Show Details...
Thumbnail
Database maintenance site: Biozentrum, University of Basel
Organism(s) covered: Caulobacter crescentus | Neisseria meningitidis | Streptomyces coelicolor | Streptomyces granaticolor
Description: Proteomics database for streptomyces and caulobacter and neisseria. Unique database in the field, containing knowledge based data of time series of protein expression for variou... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Hepatitis C virus
Description: HCVIVdb is a database of published variations observed within the internal ribosome entry site (IRES) of the hepatitis C Virus. Show Details...
Thumbnail
Database maintenance site: IOCB (Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences)
Organism(s) covered: All
Description: The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as be... Show Details...
Thumbnail
Database maintenance site: European Commission FP7, Icahn School of Medicine at Mount Sinai, UNM School of Medicine, University of Miami School of Medicine
Organism(s) covered: Homo sapiens
Description: TCRD is the central resource behind the Illuminating the Druggable Genome Knowledge Management Center (IDG-KMC). TCRD contains information about human targets, with special emph... Show Details...
Thumbnail
Database maintenance site: UNM School of Medicine
Organism(s) covered: Bacteria | Homo sapiens | Protozoa | Viruses
Description: DrugCentral is online drug information that provides information on active ingredients, chemical entities, pharmaceutical products, drug mode of action, indications, and pharmac... Show Details...
Thumbnail
Database maintenance site: CONCERT-European Joint Programme for the Integration of Radiation Protection Research
Organism(s) covered: Canis familiaris | Drosophila | Homo sapiens | Mus musculus | Rattus norvegicus
Description: STOREDB provides infrastructure for sharing data and resources in radiation biology and epidemiology. It is a platform for the archiving and sharing of primary data and outputs ... Show Details...
Thumbnail
Database maintenance site: CIRAD (International Cooperation Center for Agricultural Research for Development), Bioversity International, South Green
Organism(s) covered: Musa
Description: The Banana Genome Hub centralises databases of genetic and genomic data for the Musa acuminata crop, and is the official portal for the Musa genome resources. Show Details...
Thumbnail
Database maintenance site: Bioversity International
Organism(s) covered: Musa
Description: The Musa Germplasm Information System (MGIS) contains key information on Musa germplasm diversity, including passport data, botanical classification, morpho-taxonomic descriptor... Show Details...
Thumbnail
Database maintenance site: Wenzhou Medical University
Organism(s) covered: Homo sapiens
Description: mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different methods and population variation data. The database has the following function... Show Details...
Thumbnail
Database maintenance site: CERN (European Organisation for Nuclear Research)
Organism(s) covered: All
Description: Generalist research data repository built and developed by OpenAIRE and CERN, to ensure that everyone can join in Open Science. Show Details...
Thumbnail
Database maintenance site: CeNT (Interdisciplinary Laboratory of Biological Systems Modelling, Center of New Technology)
Organism(s) covered: All
Description: LinkProt collects information about protein chains and complexes that form links. LinkProt detects deterministic links (with loops closed by cysteine), and determines likelihood... Show Details...
Thumbnail
Database maintenance site: REFLORA Programme
Organism(s) covered: Chlorophyta | Phaeophyceae | Rhodophyta | Fungi | Viridiplantae
Description: The mission of this project was to built a virtual herbarium to display the images of Brazilian plants that are housed in foreign herbaria and was presented by the Brazilian Res... Show Details...
Thumbnail
Database maintenance site: Quantitative and Computational Biology Group, Max Planck Institute for Biophysical Chemistry
Organism(s) covered: All
Description: Proteome-pI is an online database containing information about predicted isoelectric points for 5,029 proteomes (21 million of sequences) calculated using 18 methods.The isoelec... Show Details...
Thumbnail
Database maintenance site: REFLORA Programme
Organism(s) covered: Chlorophyta | Phaeophyceae | Rhodophyta | Fungi | Viridiplantae
Description: In 2010, Brazil published the Catalog of Plants and Fungi of Brazil and launched the first online version of the List of Species of the Brazilian Flora, meeting Target 1 of the ... Show Details...
Thumbnail
Database maintenance site: Ben-Gurion University of the Negev
Organism(s) covered: Homo sapiens
Description: Knowledge of the molecular interactions of human proteins within tissues is important for identifying their tissue-specific roles and for shedding light on tissue phenotypes. Ho... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: All
Description: Dolce is a database of DNA structure motifs based on an automatic classification method consisting of the combination of supervised and unsupervised approaches. This workflow ha... Show Details...
Thumbnail
Database maintenance site: CALIPHO (Computer and Laboratory Investigation of Proteins of Human Origin Group, Swiss Institute of Bioinformatics)
Organism(s) covered: Insecta | Acari | Vertebrata
Description: The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research.Its scope includes: Immortalized cell lines; naturally ... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Homo sapiens
Description: GPnotebook is a concise synopsis of the entire field of clinical medicine focused on the needs of the General Practitioner with material organised systematically to ensure rapid... Show Details...
Thumbnail
Database maintenance site: Edwards Group, University of Western Australia, The University of Queensland
Organism(s) covered: Cicer arietinum
Description: This resource contains genome and gene sequences, features and isolationed chromosome alignments, while functional annotation can be searched in GBrowse. Chickpea forms a critic... Show Details...
Thumbnail
Database maintenance site: ANDS (Australian National Data Service), Edwards Group, University of Western Australia
Organism(s) covered: Hordeum vulgare | Oryza sativa | Triticum aestivum | Zea mays
Description: The compendium of crop Proteins with Annotated Locations (cropPAL) collates more than 550 data sets from previously published fluorescent tagging or mass spectrometry studies an... Show Details...
Thumbnail
Database maintenance site: QUT (Queensland University of Technology)
Organism(s) covered: Musa | Musa acuminata | Musa balbisiana
Description: The vast majority of the bananas currently grown and consumed were not conventionally bred but are selections made over probably thousands of years from naturally occurring hybr... Show Details...
Thumbnail
Database maintenance site: ANDS (Australian National Data Service), James Cook University
Organism(s) covered: All
Description: The Tropical Data Hub (TDH) is an open portal enabling researchers to submit information relating to the tropics in an open and collaborative way. The TDH complements existing d... Show Details...
Thumbnail
Database maintenance site: Central European Institute of Technology
Organism(s) covered: All
Description: ValidatorDB is a collection of validation results for the entire Protein Data Bank. Annotation (3-letter code) of HET residues larger than 6 heavy atoms is inspected, i.e. if th... Show Details...
Thumbnail
Database maintenance site: The University of North Carolina, Chapel Hill Eshelman School of Pharmacy
Organism(s) covered:
Description: The Chemical Probes Portal is an online open access catalog of annotated small molecule inhibitors, agonists and other chemical tools for biological research and preclinical dru... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Homo sapiens
Description: denovo-db is a collection of germline de novo variants identified in the human genome. de novo variants are those present in children but not their parents. Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: All
Description: A database for storing MultiCellDS files. In the future, MultiCellDB will include a curated library of quality-controlled digital cell lines, starting with digital representatio... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: All
Description: DataMed is a prototype biomedical data search engine. Its goal is to discover data sets across data repositories or data aggregators. In the future it will allow searching outsi... Show Details...
Thumbnail
Database maintenance site: Bioconductor
Organism(s) covered: All
Description: Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and ... Show Details...
Thumbnail
Database maintenance site: Bodleian Library, University of Oxford
Organism(s) covered: All
Description: The Oxford University Research Archive (ORA) serves as an institutional repository for the University of Oxford and is home to the scholarly research output of its members. ORA-... Show Details...
Database maintenance site: NIRRH (National Institute for Research in Reproductive Health)
Organism(s) covered:
Description: CAMPSign is a tool for identification of antimicrobial peptides belonging to one of the 45 major AMP families present in CAMPR3. The peptides are identified based on family sign... Show Details...
Database maintenance site: LIC (Life Imaging Center, University of Freiburg)
Organism(s) covered: Danio rerio
Description: ViBE-Z, the Virtual Brain Explorer for Zebrafish is an imaging and image analysis framework for virtual colocalization studies in larval zebrafish brains, currently available fo... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Homo sapiens
Description: The core of the system is tailored PACS (Picture Archiving and Communication System). It forms the basis for educational and research applications such as the development of dat... Show Details...
Thumbnail
Database maintenance site: Centre for Cell Imaging, Institute of Integrative Biology, University of Liverpool
Organism(s) covered: All
Description: A repository of image / SPM data to support users of the Centre for Cell Imaging, University of Liverpool. Show Details...
Database maintenance site: IGC (Instituto Gulbenkian de Ciencia)
Organism(s) covered: All
Description: Haeckaliens is a collection of 3D datasets and reconstructions of embryos obtained with the open-source optical tomography scanner "OPenT" . Show Details...
Thumbnail
Database maintenance site: Sage Bionetworks
Organism(s) covered: All
Description: Synapse is a collaborative, open-source research platform that allows teams to share data, track analyses, and collaborate. It provides infrastructure and hosting for datasets. Show Details...
Thumbnail
Database maintenance site: School of Clinical Medicine, University of Cambridge
Organism(s) covered: Homo sapiens
Description: The Mammographic Image Analysis Society database of digital mammograms contains 322 images (161 pairs) at 50 micron resolution in "Portable Gray Map" (PGM) format and associated... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Caenorhabditis elegans | Cricetulus griseus | Drosophila | Homo sapiens | Mus musculus
Description: The Broad Bioimage Benchmark Collection (BBBC) is a collection of freely downloadable microscopy image sets. Researchers are encouraged to use these image sets as reference poin... Show Details...
Thumbnail
Database maintenance site: UNESCO UNITWIN CS-DC
Organism(s) covered: Branchiostoma lanceolatum | Danio rerio | Oryctolagus cuniculus | Paracentrotus lividus | Sphaerechinus granularis | ...
Description: Webservice for 3D+time in vivo, in toto imaging data storage and annotation. Direct access to image processing workflows on EGI and local computer clusters for cell detection, s... Show Details...
Thumbnail
Database maintenance site: The University of Adelaide (TERN Eco-informatics)
Organism(s) covered: Animalia | Viridiplantae
Description: The Advanced Ecological Knowledge and Observation System (ÆKOS) is a data and 'research methods' knowledge base of Australia's terrestrial plants, animals and their environments... Show Details...
Database maintenance site: BioImage Informatics, IPDM, France Bio-Imaging, Institut Curie, Strand Avadis
Organism(s) covered: Aedes aegypti | Drosophila | Homo sapiens | Mus musculus | Saccharomyces
Description: In addition to data used in on-going collaborations, this database host images from France Bio Imaging microscopy facility with public access either associated to publications, ... Show Details...
Thumbnail
Database maintenance site: The Jackson Laboratory
Organism(s) covered: Homo sapiens
Description: The Jackson Laboratory Clinical Knowledgebase (CKB) is a semi-automated/manually curated database of gene/variant annotations, therapy knowledge, diagnostic/prognostic informati... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered:
Description: A repository of reusable, modular and composable models of biological parts. Show Details...
Thumbnail
Database maintenance site: Cambridge Systems Biology Centre, University of Cambridge, European Commission FP7
Organism(s) covered: Arabidopsis thaliana | Drosophila | Homo sapiens | Mus musculus | Saccharomyces cerevisiae | ...
Description: IDR is a prototype platform for publishing, mining and integrating bioimaging data at scale, following the Euro-BioImaging/ELIXIR imaging strategy using the OMERO and Bio-Format... Show Details...
Thumbnail
Database maintenance site:
Organism(s) covered: Homo sapiens
Description: MitoCheck aims to integrate information on cellular function of human genes while giving access to supporting information such as microscopy images of phenotypes Show Details...
Thumbnail
Database maintenance site: Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered: Homo sapiens
Description: The Japanese Genotype-phenotype Archive (JGA) is a service for permanent archiving and sharing of all types of individual-level genetic and de-identified phenotypic data resulti... Show Details...