Database maintenance site: Digitarium - Digitisation Centre of the Finnish Museum of Natural History and the University of Eastern Finland, Finnish Museum of Natural History
Organism(s) covered:All
Description: Finnish Biodiversity Information Facility (FinBIF) maintains this data repository in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated ...Show Details...
Database maintenance site: Danish Biodiversity Information Facility
Organism(s) covered:All
Description: DanBIF maintains this data repository in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). DanBIF carries out...Show Details...
Database maintenance site: Belgian Biodiversity Platform, BioFresh
Organism(s) covered:All
Description: The Belgium Biodiversity Platform hosts this data repository on behalf of BioFresh in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated...Show Details...
Database maintenance site: biodiversity.aq, Belgian Biodiversity Platform
Organism(s) covered:All
Description: The Belgium Biodiversity Platform hosts this data repository on behalf of the SCAR Antarctic Biodiversity Portal biodiversity.aq in collaboration with the GBIF Secretariat, buil...Show Details...
Database maintenance site: ENS (L'Ecole Normale Superieure de Nouakchott), Belgian Biodiversity Platform
Organism(s) covered:All
Description: The Belgium Biodiversity Platform hosts this data repository on behalf of GBIF Mauritania (MrBIF) in collaboration with the GBIF Secretariat, built using an installation of the ...Show Details...
Database maintenance site: Belgian Biodiversity Platform
Organism(s) covered:All
Description: The Belgium Biodiversity Platform maintains this data repository in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated Publishing Toolki...Show Details...
Database maintenance site: Nanjing Forestry University
Organism(s) covered:Eukaryota
Description: VDOG, Visual Database for Organelle Genome is an innovative database of the genome information in the organelles. Most of the data in VDOG are originally extracted from GeneBank...Show Details...
Database maintenance site: Ministerio de Salud de Chile
Organism(s) covered:Homo sapiens
Description: The Chile National Health Survey 2009-2010 includes health status questionnaires including the SF-12, mental health questionnaires, physical activity questionnaires, and biologi...Show Details...
Description: The PhenX (consensus measures for Phenotypes and eXposures) Toolkit is a web-based catalog of recommended, standard measures of phenotypes and environmental exposures for use in...Show Details...
Description: The Triticeae Toolbox (T3) is a repository for public wheat data generated by the Wheat Coordinated Agricultural Project (Wheat CAP). Funding is provided by the National Institu...Show Details...
Description: Mendeley Data is a multidisciplinary, free-to-use open research data repository, where you can upload and share data files up to 10GB so they are archived, preserved and findabl...Show Details...
Database maintenance site: Institute for Quantitative Social Science, Harvard University, The Dataverse Project, Henry A. Murray Research Archives
Organism(s) covered:All
Description: Harvard Dataverse is a research data repository running on the open source web application Dataverse. Harvard Dataverse is fully open to the public, and allows upload and browsi...Show Details...
Database maintenance site: Australian National University, CSIRO（Commonwealth Scientific and Industrial Research Organisation), Monash University
Organism(s) covered:All
Description: Research Data Australia is the data discovery service of the Australian Research Data Commons (ARDC). Research Data Australia helps you find, access, and reuse data for research...Show Details...
Database maintenance site: LUMC (Leiden University Medical Center)
Organism(s) covered:Homo sapiens
Description: The Leiden Open Variation Database (LOVD) provides a flexible, freely available tool for gene-centered collection and display of DNA variations. LOVD also provides patient-cente...Show Details...
Database maintenance site: IEDA (Interdisciplinary Earth Data Alliance), LDEO (Lamont-Doherty Earth Observatory, Columbia University)
Organism(s) covered:
Description: SESAR operates a registry that distributes the International Geo Sample Number IGSN. SESAR catalogs and preserves sample metadata profiles, and provides access to the sample cat...Show Details...
Database maintenance site: CEH (Centre for Ecology and Hydrology), NERC (Natural Environment Research Council)
Organism(s) covered:
Description: The Environmental Information Data Centre (EIDC) is a NERC Data Centre hosted by the Centre for Ecology & Hydrology (CEH). They manage nationally-important datasets concerned wi...Show Details...
Description: The Hardwood Genomics Project is a databases for expressed genes, genetic markers, genetic linkage maps, and reference populations. It provides lasting genomic and biological re...Show Details...
Database maintenance site: Oak Ridge National Laboratory
Organism(s) covered:
Description: The ORNL DAAC mission is to assemble, distribute, and provide data services for a comprehensive archive of terrestrial biogeochemistry and ecological dynamics observations and m...Show Details...
Database maintenance site: EarthChem, LDEO (Lamont-Doherty Earth Observatory, Columbia University), Marine Geoscience Data System
Organism(s) covered:
Description: IEDA systems serve as primary community data collections for global geochemistry and marine Geoscience research to support the preservation, discovery, retrieval, and analysis o...Show Details...
Description: mentha archives evidence collected from different sources and presents these data in a complete and comprehensive way. Its data comes from manually curated protein-protein inter...Show Details...
Database maintenance site: College of Earth, Ocean and Atmospheric Science, Oregon State University, San Diego Supercomputer Center, Scripps Institution of Oceanography, University of California
Organism(s) covered:
Description: Earthref.org is a compilation of of databases, networks and repositories for data and models on Earth science. This internet resource supports the quantitative understanding of ...Show Details...
Database maintenance site: Oak Ridge National Laboratory, University of California Santa Barbara, University of New Mexico
Organism(s) covered:
Description: DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data.Show Details...
Database maintenance site: BSC (Barcelona Supercomputing Center), Institute for Research in Biomedicine
Organism(s) covered:Homo sapiens
Description: PMut Data Repository collects predictions of the pathological effect of all possible single amino acid variants on Uniref Human protein sequences. Predictions were prepared usin...Show Details...
Description: GSA is a data repository specialized for archiving raw sequence reads. It supports data generated from a variety of sequencing platforms ranging from Sanger sequencing machines ...Show Details...
Database maintenance site: Université catholique de Louvain
Organism(s) covered:Fungi
Description: BCCM/MUCL develops and preserves the collection of filamentous fungi, yeasts and arbuscular mycorrhizal fungi, as well as the associated information, facilitates its valorizatio...Show Details...
Database maintenance site: WIV-ISP (Section of Mycology and Aerobiology, Scientific Institute of Public Health)
Organism(s) covered:Ascomycetes | Basidiomycetes | Fungi incertae sedis
Description: BCCM/IHEM is a fungal culture collection specialising in medical and veterinary isolates. They have almost 15000 isolates available from all over the world: yeasts and filamento...Show Details...
Database maintenance site: SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:Viruses
Description: ViralZone is a web resource for viral genes and families, providing detailed molecular and epidemiological information, along with virion and genome figures. Each virus or famil...Show Details...
Database maintenance site: SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Description: The SugarBind Database (SugarBindDB) was created in 2002 as part of an effort by the MITRE Corporation (http://www.mitre.org) to develop a pathogen-capture technology based on t...Show Details...
Description: The BCCM/DCG public collection is the only culture collection worldwide specialized in diatoms, the most species-rich and ecologically important algal group. Other microalgae in...Show Details...
Database maintenance site: ITM (Institute of Tropcial Medicine)
Organism(s) covered:Mycobacterium
Description: BCCM/ITM harbours one the largest and most diverse collections of well-documented mycobacteria worldwide, including the TDR TB-Strain bank. BCCM/ITM is hosted by and sharing its...Show Details...
Database maintenance site: Dessimoz Lab,Computational Evolutionary Biology and Genomics, SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:All
Description: The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes. The distinctive features of OMA are its broad scope and si...Show Details...
Description: BCCM/ULC is a small and dedicated public collection, currently containing one of the largest collections of documented (sub)polar cyanobacteria worldwide. The BCCM/ULC collectio...Show Details...
Database maintenance site: LM-UGent (Laboratory of Microbiology, Ghent University, Faculty of Sciences)
Organism(s) covered:Bacteria
Description: BCCM/LMG is a bacterial culture collection currently comprising over 25.000 well-characterized strains. The biological origin of our collection is very broad, including bacteria...Show Details...
Database maintenance site: LABGeM (Laboratoire d'Analyses Bioinformatiques pour la Genomique et le Metabolisme)
Organism(s) covered:Bacteria
Description: MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation. Its relational database schema stores precalculated results of syn...Show Details...
Description: LiceBase is a database for sea lice genomics. LiceBase provides the genome annotation of the Atlantic salmon louse Lepeophtheirus salmonis, a genome browser, Blast functionality...Show Details...
Description: The Enzyme Portal integrates publicly available information about enzymes, such as small-molecule chemistry, biochemical pathways and drug compounds.Show Details...
Description: The Ensembl genome annotation system, developed jointly by the EBI and the Wellcome Trust Sanger Institute, has been used for the annotation, analysis and display of vertebrate ...Show Details...
Database maintenance site: Laboratory of Informatics and Chemistry
Organism(s) covered:All
Description: Dolbico, the Database Of Local Biomolecular Conformers, stores DNA structural data including the information about DNA local spatial arrangement. The main aim of Dolbico is the ...Show Details...
Description: CRISPRdb acts as a gateway to a publicly accessible database and software. It enables the easy detection of CRISPR sequences in locally-produced data and the consultation of CRI...Show Details...
Description: The Sequencing Initiative Suomi (SISu) search engine offers a way to search for data on sequence variants in the Finnish population. It provides valuable summary data for resear...Show Details...
Database maintenance site: SIB (Swiss Institute of Bioinformatics), Swiss Institute of Bioinformatics and the Biozentrum University of Basel
Organism(s) covered:All
Description: Continuous automated benchmarking of computational protein structure prediction methods (and model quality estimation techniques). CAMEO assessment is based on blind predictions...Show Details...
Database maintenance site: LBNL (Lawrence Berkeley National Laboratory)
Organism(s) covered:
Description: KBase is the first large-scale bioinformatics system that enables users to upload their own data, analyze it (along with collaborator and public data), build increasingly realis...Show Details...
Database maintenance site: VIB (Flanders Institute for Biotechnology)
Organism(s) covered:All
Description: The BCCM/GeneCorner Plasmid Collection warrants the long-term storage and distribution of plasmids, microbial host strains and DNA libraries of fundamental, biotechnological, ed...Show Details...
Database maintenance site: Laboratory of Developmental Biology, Graduate School of Science, Osaka University
Organism(s) covered:Metazoa
Description: REGULATOR is a metazoan transcription factor (TF) and maternal factor resource, specifically designed for developmental biology studies. Maternal factors were expressed in unfer...Show Details...
Description: SureChEMBL is a publicly available large-scale resource containing compounds extracted from the full text, images and attachments of patent documents. The data are extracted fro...Show Details...
Database maintenance site: GBIF (Global Biodiversity Information Facility), SiB Colombia
Organism(s) covered:All
Description: The Colombian Biodiversity Information System (SiB Colombia) maintains this data repository, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). Able to...Show Details...
Database maintenance site: Canadensys, Universite de Montreal Biodiversity Centre, GBIF (Global Biodiversity Information Facility)
Organism(s) covered:All
Description: Canadensys maintains this data repository, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). Able to assign DOIs to datasets, it ensures the data is d...Show Details...
Database maintenance site: GBIF (Global Biodiversity Information Facility), Atlas of Living Australia
Organism(s) covered:All
Description: The Atlas of Living Australia (GBIF Australia) maintains this data repository in collaboration with the GBIF Secretariat, built using an installation of the GBIF Integrated Publ...Show Details...
Database maintenance site: He Group, University of Michigan Medical School
Organism(s) covered:All
Description: A linked data server designed for ontologies. Ontobee is aimed to facilitate ontology data sharing, visualization, query, integration, and analysis. Ontobee dynamically derefere...Show Details...
Database maintenance site: GBIF (Global Biodiversity Information Facility in Spain), GBIF (Global Biodiversity Information Facility, Copenhagen, Denmark)
Organism(s) covered:All
Description: GBIF Spain maintains this data repository, built using an installation of the GBIF Integrated Publishing Toolkit (IPT). Able to assign DOIs to datasets, it ensures the data is d...Show Details...
