ANISEED: Ascidian Network of In Situ Expression and Embryological Data
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| Database maintenance site: | Institut de Biologie du Développement de Marseille |
| Country/Region: | France |
| Database description: | ANISEED is a database about gene expression in Ascidian embryos. It contains detailed anatomical ontologies for Ascidian embryos, and quantitative geometrical descriptions of developing cells obtained from reconstructed three-dimensional (3D) embryos up to the gastrula stages. In this database, fully annotated gene model sets are linked to high-resolution spatial gene expression patterns in wild-type and experimentally manipulated conditions and to experimentally validated cis-regulatory regions imported from specialized databases or extracted from literature articles. This database allows searches using following categories: 1) Genome Annotations (genes, cDNA clones, cis-regulatory regions) 2) Anatomy (anatomical ontology, embryo scheme) 3) gene Expression & Function (expression data, phenotypes) 4) Literature. It also allows exploration by BLAST or genome browser. |
| Organism(s) covered: | , , , , , , |
| Tag - Target: | Genome/Gene |
| Tag - Information type: | Sequence, Expression, Image/Movie, Bibliography/Documents |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://www.aniseed.cnrs.fr/aniseed/download/download_data |
| Link(s) to Metadata of downloadable data: | http://www.aniseed.cnrs.fr/aniseed/download/download_data |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000752 |
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Similar databases:
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DBTGR MAGEST LegumeIP Tumor Associated Gene database CIPRO MachiBase DBSCR e-Mouse Atlas IMORI Radiation Gene |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2015-03-10 |
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Last update date of this record:
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2015-03-10 |
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Record license:
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Creative Commons CC0 license |