Inactive
(Over 14 days)
(Over 14 days)
PmiRKB: Plant microRNA Knowledge Base
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| Database name: | |
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| URL: | |
| Database maintenance site: | Zhejiang University |
| Country/Region: | China |
| Database description: | PmiRKB (Plant microRNA Knowledge Base) is a database collecting information on miRNAs from Arabidopsis thaliana and Oryza sativa.The functional modules that are provided are MiR-Tar, SNPs, Self-reg and Pri-miRNAs. The MiR module contains miRNA sequences and information on pre-miRNA clusters. Target regions of SNPs-from 7 Arabidopsis and of 21 Oryza subspecies-found in miRNAs and pre-miRNAs are provided. Scenes of transcription surrounding the pre-miRNAs are made available with the Pri-miR module, and cleavage signals in target recognition sites of miRNA are revealed by the MiR-Tar module. The Self-reg module makes it possible to infer signals of remnants produced in the process of miRNA-mediated self-regulation and miRNA precursor processing. A keyword search option is provided. |
| Organism(s) covered: | , |
| Tag - Target: | Genetic variation, RNA |
| Tag - Information type: | Sequence |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Inactive |
| Link(s) to Downloadable data: | - |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | - |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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Link to TogoTV:
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Link to FAIRsharing:
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Similar databases:
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PolymiRTS miRNEST miRBase miRTarBase EVmiRNA PmiREN Project Specific Custom Tracks - ncRNA.org mirEX VISDB LncBook |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2022-09-21 |
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Record license:
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Creative Commons CC0 license |