UCSC Genome Browser
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| Database name: | |
| Alternative name: | - |
| URL: | |
| Database maintenance site: | University California Santa Cruz |
| Country/Region: | United States |
| Database description: | UCSC Genome Browser is a database which contains the reference sequence and working draft assemblies for a large collection of genomes. It is also a portal site to the ENCODE and Neandertal projects. This database provides following tools; 1) The Genome Browser zooms and scrolls over chromosomes, showing the work of annotators worldwide. 2) The gene Sorter shows expression, homology and other information on groups of genes that can be related in many ways. 3) Blat quickly maps your sequence to the genome. 4) The Table Browser provides convenient access to the underlying database. 5) Visigene lets you browse through a large collection of in situ mouse and frog images to examine expression patterns. 6) Genome Graphs allows you to upload and display genome-wide data sets. |
| Organism(s) covered: | , , , , , |
| Tag - Target: | Genome/Gene, Genetic variation, Protein |
| Tag - Information type: | Sequence, Expression, Image/Movie |
| Reference(s) - PubMed ID/DOI: | PubMed ID: DOI: |
| Language(s): | English |
| Operational status: | Active |
| Link(s) to Downloadable data: | http://hgdownload.soe.ucsc.edu/downloads.html |
| Link(s) to Metadata of downloadable data: | - |
| Link(s) to Terms of use: | http://genome.ucsc.edu/license/ |
| Link(s) to "How to use": | - |
| Contact information of database: | - |
| Link(s) to API / SPARQL endpoint | - |
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Link to LSDB Archive:
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Link to MEDALS Database list:
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- |
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Link to TogoTV:
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Link to FAIRsharing:
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https://fairsharing.org/biodbcore-000107 |
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Similar databases:
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BGD AmoebaDB Chickpea Portal TOT-DB TIARA TOMATOMICS HGD Ghost Database iDog GeMDBJ |
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Record maintainer
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Integbio Database Catalog |
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Record source:
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Date of creation of this record:
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2013-06-17 |
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Last update date of this record:
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2019-05-12 |
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Record license:
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Creative Commons CC0 license |